Ok, I got it fixed now.
I cut/pasted the whole TG:G folder from C:/Program Files(x86)/
Then when I used the 'Restore' setting on your patcher it said 'already patched' which was kinda strange for restoring.
So then I re-patched and got the 'crack successful' message: http://i.imgur.com/VqBg4Qk.jpg
Then I ran the game, making to to have it run as Administrator.
I then loading an Endless Game on a Normal Sized Map, 1975, USA. I checked every city on the map, no red buildings.
So I did this again, three more times; generating new maps and checking every city.. no red buildings.
That last time when I exited to the main menu I saw an all too familiar scene, one of the 'animated' backgrounds taking place in the 1960's where I always, always saw a red building in a particular spot.
The red building was gone, it was normal.
So I feel pretty confident now that it's fixed finally.
Hopefully it stays fixed hehe.
Now, now I can finally play, like I thought I could before
Thank You Again, So Much,